| Id |
Cis Name |
Cis Elem. Id |
Length |
Sequence |
Box Name |
| 1 | Em1a_Em | SH00001 | 9 | ACACGTGGC | ABR |
| 2 | Em1b_Em/Dc3 | SH00002 | 9 | ACACGTGCC | ABR |
| 3 | MotifA_OsEm | SH00003 | 9 | GTACGTGTC | ABR |
| 4 | Motif1_Rab16 | SH00004 | 9 | GTACGTGGC | ABR |
| 5 | G-box-1_Adh | SH00005 | 9 | CCACGTGGA | ABR |
| 6 | ABRE2_HvA1 | SH00006 | 9 | CTACGTGGC | ABR |
| 7 | ABREA_Rab28 | SH00007 | 8 | TACGTGGC | ABR |
| 8 | ABREB_Rab28 | SH00008 | 8 | CACGTGGC | ABR |
| 9 | ABRE3_HvA22 | SH00009 | 9 | CCACGTACA | ABR |
| 10 | 57_AR-H | SH00010 | 9 | CCACGTACT | ABR |
| 11 | sitesA/D_DLEC2/PHS | SH00011 | 7 | CACGTCA | ABR |
| 12 | CE3_OsEm/HvA1 | SH00012 | 12 | ACGCGTGTCCTC | CE3 |
| 13 | Motif3_Rab16B | SH00014 | 10 | GCCGCGTGGC | M3 |
| 14 | Hex3_synthetic | SH00015 | 10 | GACGCGTGGC | H3 |
| 15 | LS5_NPR1 | SH00016 | 11 | CGACGCGTGTC | LS |
| 16 | distB_napA | SH00017 | 10 | GCCACTTGTC | DB |
| 17 | MYC_rd22 | SH00018 | 8 | ACACATGT | MYC |
| 18 | MYB_rd22 | NH00019 | 6 | [TC]AAC[GT]G | MYB |
| 19 | CE1_HvA22 | SH00023 | 9 | TGCCACCGG | CE1 |
| 20 | Motif2a_Rab16A | SH00024 | 12 | CCGCCGCGCCTG | M2A |
| 21 | Motif2b_ | SH00025 | 11 | CCGCCGCGCTG | M2B |
| 22 | Sph/RY_C1 | SH00026 | 17 | CGTGTCGTCCATGCATG | SPH |
| 23 | Em | SH00027 | 10 | GCATGCATGC | EM |
| 24 | 1_DLEC2 | NH00028 | 9 | [GC]CATGNNN[GC] | DLE |
| 25 | CdeT27-45 | SH00032 | 16 | AAGCCCAAATTTCACA | CDE |
| 26 | GRA_Rab17 | SH00033 | 12 | CACTGGCCGCCC | GRA |
| 27 | Rab28 | SH00034 | 9 | CATGCCGCC | RAB |
| 28 | DRE | NH00035 | 8 | [TAC]ACCGA[CG][AG] | DRE |
| 29 | ABRE3HVA22 | S000118 | 10 | GCCACGTACA | ABR |
| 30 | ABREA2HVA1 | S000140 | 10 | CCTACGTGGC | ABR |
| 31 | Sph | SH00051 | 13 | TCCATGCATGCAC | SPH |
| 32 | GA-response_a-amylase | SH00038 | 16 | GGCCGATAACAAACTC | GAR |
| 33 | Pyrimidine-box | N00041 | 8 | [CT]CTTTTA[CT] | PYR |
| 34 | W-Box(O2S) | N00045 | 6 | TTGAC[TC] | W |
| 35 | GARE | N00038 | 7 | TAACA[AG]A | GAR |
| 36 | O2S | SH00040 | 10 | GACCATCATC | O2S |
| 37 | AMYBOX | S000021 | 7 | TATCCAT | AMY |
| 38 | DAE | SH00053 | 9 | CAAGCAACA | DAE |
| 39 | GARE3_HvEPB | SH00054 | 14 | GTGTCAGATTCTGC | GAR |
| 40 | GAMYB | SH00055 | 8 | [CT]AAC[CG][GA][AC][CA] | GMYB |
| ABA |
AUX |
BR |
CK |
ETH |
GA |
JA |
SA |
TATA |
MISC |